Research Techniques & Certificates

Computer Languages

  • R Icon R (main)
    R is a language primarily used for statistical computing and graphics, making it popular in data science.
  • Python Icon Python
    Python is a versatile programming language used for web development, data analysis, AI, and more.
  • SAS Icon SAS
    SAS is used for advanced analytics, business intelligence, and data management.
  • Java Icon Java (entry)
    Java is a general-purpose programming language that is platform-independent and widely used in web applications.
  • Linux Icon Linux (entry)
    Linux is an open-source operating system used for various computing environments, from servers to desktops.

Statistical Modeling

  • Linear Regression Icon Linear Regression
    Linear regression models the relationship between a dependent variable and one or more independent variables.
  • ANOVA Icon ANOVA
    ANOVA (Analysis of Variance) is used to compare means across multiple groups to find if they significantly differ.
  • Mixed Effect Icon Mixed Effect Models
    Mixed effect models analyze data that includes both fixed and random effects, useful for complex data structures.
  • Spatiotemporal Data Icon Spatiotemporal Data Analysis
    Spatiotemporal data analysis studies data that changes over space and time, often used in environmental studies.
  • Longitudinal Data Icon Longitudinal Data Analysis
    Longitudinal data analysis tracks data collected repeatedly over time, important for understanding changes within subjects.

Bioinformatics

  • Transcriptomics Icon Transcriptomics
    Transcriptomics involves the study of RNA transcripts, allowing for insights into gene expression in various biological contexts.
  • Microbiome Icon Microbiome (16S rRNA Sequencing Analysis)
    Microbiome analysis through 16S rRNA sequencing is used to identify and compare bacteria within a sample, often for ecological and health-related studies.
  • Qiime2 Icon Qiime2
    Qiime2 is an open-source bioinformatics software for microbiome analysis, used to analyze and interpret high-throughput microbial community sequencing data.

3D Technology

  • 3D Printing Icon 3D Printing
    3D Printing involves creating physical objects from digital models, often used in prototyping, manufacturing, and medical applications.
  • 3D CAD Icon 3D CAD
    3D CAD (Computer-Aided Design) is used to create precise 3D models and designs, facilitating engineering, architecture, and manufacturing processes.

General Molecular Biology Techniques

  • General Cloning Icon General Cloning
    General cloning techniques are used to replicate DNA sequences and are fundamental for genetic manipulation and study.
  • Vector Construction Icon Engineering Plasmids
    Engineering plasmids involves constructing vector backbones for antigen delivery or genetic modification applications.
  • Inducible System Icon Inducible Systems
    Inducible systems are designed to control gene expression, allowing targeted and timely gene activation or repression.
  • DNA Mutagenesis Icon DNA Mutagenesis
    DNA mutagenesis techniques, such as allelic exchange and transduction mutagenesis, introduce targeted mutations to study gene function.
  • Gel Electrophoresis Icon Gel Electrophoresis
    Gel electrophoresis, including RNA/DNA gels, SDS-PAGE, and 2D-PAGE, is used to separate biomolecules by size and charge.
  • DNA, RNA Purification Icon DNA, RNA Purification
    DNA and RNA purification techniques are crucial for obtaining clean samples for downstream molecular analysis.
  • LPS profiling Icon LPS profiling
    LPS profiling is the analysis of lipopolysaccharides (LPS) in bacterial cell membranes to understand their structure, composition, and role in immune response and pathogenicity.
  • qRT-PCR Icon qRT-PCR
    qRT-PCR is a quantitative PCR technique used to measure RNA levels, allowing gene expression analysis.
  • Protein Purification Icon Protein Purification
    Protein purification isolates specific proteins for functional and structural studies.
  • Western Blotting Icon Western Blotting
    Western blotting is a technique used to detect specific proteins in a sample using antibodies.
  • ELISA Icon Enzyme-linked immunosorbent assay (ELISA)
    ELISA is a plate-based assay used to detect and quantify substances such as proteins, antibodies, and hormones.
  • Bacteria Cell Fractionation and Protein Profiling Icon Bacteria Cell Fractionation and Protein Profiling
    Bacteria cell fractionation and protein profiling involve separating bacterial cellular components to analyze and identify proteins, providing insights into their functions and roles within the cell.
  • Protein Interaction Assays Icon Protein Interaction Assays
    Protein interaction assays investigate interactions between proteins, revealing signaling and structural pathways.
  • Beta-Galactosidase Assays Icon Beta-Galactosidase Assays
    Beta-galactosidase assays measure enzyme activity, often used in gene expression studies.

Bacterial Phage Techniques

  • Phage Maintenance Icon General Maintenance
    General maintenance of bacterial phages includes processes like expansion, storage, and titration to ensure viability and usability.
  • Transduction Icon Transduction
    Transduction is a method used to introduce genetic material into bacterial cells via bacteriophages, aiding in genetic studies and manipulation.

General Microbiology Techniques

  • Cell Culture Icon Standard Bacterial Cell Culture
    Standard bacterial cell culture techniques involve growing bacteria in controlled conditions to study their behavior, characteristics, and applications.
  • Isolation Icon Isolation and Identification of Bacterial Species
    Techniques for isolating and identifying bacterial species are essential in microbiology for species characterization and study.
  • Biochemical Testing Icon Various Biochemical Testing
    Biochemical tests are conducted to assess metabolic and chemical properties of bacteria, aiding in identification and classification.
  • RWV Bioreactor Icon Culture using dynamic NASA-designed Rotating Wall Vessel (RWV) bioreactors
    The Rotating Wall Vessel (RWV) bioreactor, designed by NASA, provides a dynamic culture environment that simulates microgravity for advanced bacterial studies.

Cell and Tissue Culture Techniques

  • Monolayer Cell Culture Icon Standard monolayer cell culture techniques (including intestinal epithelial cells, monocytes, macrophages)
    Standard monolayer cell culture techniques are used for cultivating cells such as intestinal epithelial cells, monocytes, and macrophages in a two-dimensional layer.
  • 3D Culture Icon Three-dimensional (3-D) organotypic intestinal cell culture using RWV bioreactors
    Three-dimensional (3D) organotypic intestinal cell cultures are developed using RWV bioreactors, providing a more physiologically relevant model for cell studies.
  • Co-Culture Icon 3-D human intestinal epithelial co-cultures containing human macrophages
    3D human intestinal epithelial co-cultures integrate human macrophages, creating a complex model to study host-microbe interactions.
  • Bacterial Infection Studies Icon Bacterial infection studies (gentamicin protection assay)
    Bacterial infection studies, such as the gentamicin protection assay, are used to investigate bacterial invasion and replication within host cells.
  • Tissue Regeneration Icon Tissue Regeneration
    Tissue regeneration techniques explore the ability of cells and tissues to repair and renew, essential in regenerative medicine research.

Caenorhabditis elegans Techniques

  • General Maintenance Icon General Maintenance
    General maintenance of *C. elegans* includes feeding, freezing, and recovery processes to ensure healthy and viable populations.
  • Egg Preparation Icon Egg and Larvae Preparation
    Egg preparation and larvae staging (L1 and L4) are essential for developmental studies and controlled experimental setups.
  • Infection Study Icon Infection Study and TD50
    Infection studies in *C. elegans*, including TD50 determination, are used to analyze pathogen interactions and host response.

Microscopy and Staining Techniques

  • Light Microscopy Icon Light Microscopy
    Light microscopy is a basic technique used to visualize cells and tissues with the aid of visible light.
  • Phase Contrast Microscopy Icon Phase Contrast Microscopy
    Phase contrast microscopy enhances contrast in transparent specimens, making it ideal for observing live cells.
  • Epi-Fluorescent Microscopy Icon Epi-Fluorescent Microscopy
    Epi-fluorescent microscopy uses fluorescence to illuminate specimens, allowing visualization of specific cellular components.
  • Laser Scanning Confocal Microscopy Icon Laser Scanning Confocal Microscopy (4 lasers to white laser, multiple channels)
    Laser Scanning Confocal Microscopy uses multiple laser channels, including options from 4 lasers to a white laser, to produce high-resolution, 3D images of specimens by selectively illuminating specific depths and capturing detailed optical sections.
  • Chemical Staining Techniques Icon Expertise in a wide range of chemical staining techniques for microscopic imaging of both bacterial and mammalian cells, including immunohistochemical profiling and biofilm staining
    Expertise in various chemical staining techniques for bacterial and mammalian cells, including immunohistochemistry and biofilm staining.
  • SEM and TEM Icon SEM and TEM (not expert)
    Scanning Electron Microscopy (SEM) and Transmission Electron Microscopy (TEM) are advanced techniques for high-resolution imaging of cellular structures.

Animal Studies Techniques

  • Polyclonal Antibody Generation Icon Generating Polyclonal Antibodies
    Techniques for generating polyclonal antibodies using small laboratory animals such as rabbits, mice, and chickens.
  • Administration Icon Oral, Intraperitoneal, and Intradermal Administration
    Methods for administering substances orally, intraperitoneally, or intradermally to laboratory animals.
  • Animal Infections Icon Animal Infections and LD50 Studies
    Techniques for studying animal infections and determining the lethal dose 50% (LD50) in experimental animals.
  • Tissue Dissection Icon Tissue Dissections in Mice and Chickens
    Procedures for dissecting tissues in mice and chickens to study various biological processes and diseases.
  • Organ Examination Icon Examination of Mouse and Chicken Organs
  • Isolation and Quantitation of Microorganisms from Animal Tissues and Organs Isolation and Quantitation of Microorganisms from Animal Tissues and Organs
  • Cardiac Puncture Icon Cardiac Puncture
    Cardiac puncture is a technique used for obtaining blood samples from laboratory animals for analysis.

Biofilm Study Techniques

  • Biofilm Culture Icon Standard Biofilm Culture
    Standard biofilm culture techniques are used to grow single or mixed-species biofilms under controlled conditions.
  • EPS Detection Icon EPS Detection
    Techniques for detecting extracellular polymeric substances (EPS) and other extracellular compounds in biofilms.
  • Live/Dead Staining Icon Live/Dead Staining
    Live/dead staining techniques are used to assess the viability of cells within a biofilm, distinguishing live cells from dead ones.

Space Life Science Techniques

  • Spaceflight Hardware Icon Spaceflight Hardware for ISS Experiments
    Utilization of various spaceflight hardware to conduct biological experiments aboard the International Space Station (ISS).
  • Spaceflight Analogue Systems Icon Spaceflight-Analogue Cell Culture Systems
    Use of spaceflight-analogue cell culture systems to simulate microgravity and other space conditions for biological studies on Earth.
  • Spaceflight Experiment aboard ISS Icon Spaceflight Experiment aboard ISS

Development of various selective or selective/deferential media

  • Selective Media Icon Developing Selective Media
    Developing selective media involves creating a growth medium that supports the growth of specific microorganisms while inhibiting the growth of others.
  • Differential/Selective Media Icon Developing Differential/Selective Media
    Developing differential/selective media involves formulating a growth medium that not only supports the growth of specific microorganisms while inhibiting others but also allows for the differentiation between microbial types based on their biochemical properties.

Languages

  • English Language Icon English
    Proficient in English, used for communication, academic writing, and professional collaboration.
  • Korean Language Icon Korean
    Fluent in Korean, used for native communication, cultural understanding, and bilingual support.